Difference between revisions of "Shanghai 2017"

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[[Image:Shanghai2017.jpg|center|frame|800px]]
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<center><big>'''2017 Madagascar School in Shanghai'''</big></center>
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== Introduction ==
 
== Introduction ==
  
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! colspan="3" style="background:#ffdead;" | Before the school: Sunday, July 9, 2017
 
! colspan="3" style="background:#ffdead;" | Before the school: Sunday, July 9, 2017
 
|-
 
|-
| 14:00-16:00
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| 14:00-18:00
 
! colspan="2"  | Bring your laptop and get individual help with Madagascar
 
! colspan="2"  | Bring your laptop and get individual help with Madagascar
 
|-
 
|-
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| 8:40-9:30
 
| 8:40-9:30
 
! colspan="2"  | Madagascar principles (Sergey Fomel)
 
! colspan="2"  | Madagascar principles (Sergey Fomel)
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|-
 +
|
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| colspan="2"  |
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[http://www.ahay.org/wikilocal/docs/Madagascar-Shanghai.pdf Slides] (29M)
 
|-
 
|-
 
| 9:30-9:40
 
| 9:30-9:40
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|-
 
|-
 
| 9:40-10:30
 
| 9:40-10:30
! colspan="2" | Madagascar development: writing programs in C, C++ (Gang Fang)
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! colspan="2" | Madagascar development: writing programs in C, C++, Fortran-90, and Python (Gang Fang)
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|-
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|
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| colspan="2"  |
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[http://www.ahay.org/wikilocal/docs/Madagascar2017_GangFang.pdf Slides] (4.9M)<br><br>
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[https://github.com/ahay/src/tree/master/book/rsf/school2017/c C example]<br>
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[https://github.com/ahay/src/tree/master/book/rsf/school2017/c++ C++ example]<br>
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[https://github.com/ahay/src/tree/master/book/rsf/school2017/f90 Fortran-90 example]<br>
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[https://github.com/ahay/src/tree/master/book/rsf/school2017/python Python example]
 
|-
 
|-
 
| 10:30-11:30
 
| 10:30-11:30
 
! colspan="2" | Plotting Guidance and SConstruct Flow (Xufei Gong)
 
! colspan="2" | Plotting Guidance and SConstruct Flow (Xufei Gong)
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|-
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|
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| colspan="2"  |
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[http://www.ahay.org/wikilocal/docs/xufeigong.pdf Slides] (1.5M)<br>
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[https://github.com/ahay/src/tree/master/book/rsf/school2017/modeling Modeling example]
 
|-
 
|-
 
| 11:30-14:00
 
| 11:30-14:00
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| 14:00-15:30
 
| 14:00-15:30
 
! colspan="2" | Parallel programming (MPI, OpenMP, Pscons) in Madagascar (Chenlong Wang)
 
! colspan="2" | Parallel programming (MPI, OpenMP, Pscons) in Madagascar (Chenlong Wang)
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|-
 +
|
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| colspan="2"  |
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[http://www.ahay.org/wikilocal/docs/chenlongw.pdf Slides] (484K)
 
|-
 
|-
 
| 15:30-15:50
 
| 15:30-15:50
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| 15:50-17:00
 
| 15:50-17:00
 
! colspan="2" |Writing a reproducible paper using LaTeX and Madagascar (Jiubing Cheng)
 
! colspan="2" |Writing a reproducible paper using LaTeX and Madagascar (Jiubing Cheng)
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|-
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|
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| colspan="2"  |
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[http://www.ahay.org/wikilocal/docs/WritingAPaper.pdf Slides] (3.7M)<br>
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[https://github.com/ahay/src/tree/master/book/tutorial/authors/geophys Example]
 
|}
 
|}
  
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|-
 
|-
 
| 8:30-10:00     
 
| 8:30-10:00     
! colspan="2"  | Seismic data processing with Madagascar (Yang Liu)
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! colspan="2"  | Geophysicsl data processing with Madagascar (Yang Liu)
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|-
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|
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| colspan="2"  |
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[http://www.ahay.org/wikilocal/docs/Yangliu2017.pdf Slides] (8.1M)<br><br>
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[http://ahay.org/RSF/book/rsf/school2017/seismic.html Seismic example]<br>
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[http://ahay.org/RSF/book/rsf/school2017/gravity.html Gravity example]<br>
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[http://ahay.org/RSF/book/rsf/school2017/csem.html CSEM example]
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|-
 
|-
 
| 10:00-10:30
 
| 10:00-10:30
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|-
 
|-
 
| 10:30-11:30
 
| 10:30-11:30
! colspan="2" |Python interface and contributing to Madagascar (Sergey Fomel)
+
! colspan="2" |Additional topics (Sergey Fomel)
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|-
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|
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| colspan="2"  |
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[http://www.ahay.org/wikilocal/docs/Additional-Shanghai.pdf Slides] (6.4M)<br>
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[https://github.com/sfomel/ipython/blob/master/Shanghai.ipynb Example Jypyter notebook]
 
|-
 
|-
 
| 11:30-14:00
 
| 11:30-14:00
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|-
 
|-
 
| 14:00-17:00
 
| 14:00-17:00
! colspan="2" | Open discussion(Sharing your experiences in Madagascar)
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! colspan="2" | Sharing experience in Madagascar
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|-
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|
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! colspan="2" | Guoning Wu (China University of Petroleum - Beijing)
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|-
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|
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| colspan="2"  |
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[http://www.ahay.org/wikilocal/docs/Wuguoning.pdf Slides] (14M)
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|-
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|
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! colspan="2" | Peng Zou (Tongji University)
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|-
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|
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| colspan="2"  |
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[http://www.ahay.org/wikilocal/docs/Pengzou.pdf Slides] (1.6M)
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|-
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|
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! colspan="2" | Yufeng Wang (China University of Petroleum - Beijing)
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|-
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|
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| colspan="2"  |
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[http://www.ahay.org/wikilocal/docs/cuQRTM.pdf Slides] (2.3M)
 
|}
 
|}
  
 
== Location ==
 
== Location ==
  
Rui’an Building, Tongji University, Shanghai, China
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Room 205B,  Rui’an Building, Tongji University, Shanghai, China
  
同济大学,瑞安楼,上海市杨浦区四平路1239号
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同济大学,瑞安楼 205B室,上海市杨浦区四平路1239号
  
 
== Registration ==
 
== Registration ==
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== Pre-workshop Assignment ==
 
== Pre-workshop Assignment ==
  
You must download and install the Madagascar package (stable version 1.8)  in the days before the school. If issues come up, there will an opportunity to get installation help on Sunday, July 9. Remember to bring your laptop (Linux, Mac) to the session!
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You must [[download]] and [[Installation|install]] the Madagascar package in the days before the school. If issues come up, there will an opportunity to get installation help on Sunday, July 9. Remember to bring your laptop (Linux, Mac) to the session!
 
=== Additional Installation Requirements ===
 
=== Additional Installation Requirements ===
#Install Latex
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#Latex
#MPICH2/OPENMP
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#MPICH2/OPENMPI
  
 
=== QQ group ===
 
=== QQ group ===
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* '''Jiubing Cheng''' is a Professor of School of Ocean and Earth Science, Tongji University. He received a Ph.D. in Geophysics from Tongji University in 2003. http://mgg.tongji.edu.cn/space/cjb/
 
* '''Jiubing Cheng''' is a Professor of School of Ocean and Earth Science, Tongji University. He received a Ph.D. in Geophysics from Tongji University in 2003. http://mgg.tongji.edu.cn/space/cjb/
 
* '''Sergey Fomel'''is a Professor at the Jackson School of Geosciences, the University of Texas at Austin. He received a Ph.D. in Geophysics from Stanford University in 2001. Sergey started work on Madagascar (at that time named RSF for Regularly Sampled Format) in 2003. http://www.jsg.utexas.edu/researcher/sergey_fomel/
 
* '''Sergey Fomel'''is a Professor at the Jackson School of Geosciences, the University of Texas at Austin. He received a Ph.D. in Geophysics from Stanford University in 2001. Sergey started work on Madagascar (at that time named RSF for Regularly Sampled Format) in 2003. http://www.jsg.utexas.edu/researcher/sergey_fomel/
* '''Yang Liu''' is a Professor of Geophysics at College of Geo-exploration science and technology at Jilin University, China. He received a Ph.D. in Geophysics from Jilin University in 2006 and was a Postdoctoral fellow at Bureau of Economic Geology, The University of Texas at Austin from 2007 to 2010. His research focuses mainly on seismic data processing. http://gest.jlu.edu.cn/?mod=info&act=view&id=54
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* '''Yang Liu''' is a Professor of Geophysics at College of Geo-exploration science and technology at Jilin University, China. He received a Ph.D. in Geophysics from Jilin University in 2006 and was a Postdoctoral fellow at Bureau of Economic Geology, The University of Texas at Austin from 2007 to 2010. His research focuses mainly on seismic data processing. http://gest.jlu.edu.cn/?mod=info&act=view&id=2296
 
* '''Gang Fang''' is an assistant research fellow at Qingdao Institute of Marine Geology, China Geological Survey. He received a Ph.D in Geophysics from China University of Petroleum (East China) in 2014 and was a visiting Ph.D student at Bureau of Economic Geology, The University of Texas at Austin from 2012 to 2013 sponsored by China State Scholarship Fund. His research interests are seismic modeling and seismic imaging. https://www.linkedin.com/profile/view?id=92186291
 
* '''Gang Fang''' is an assistant research fellow at Qingdao Institute of Marine Geology, China Geological Survey. He received a Ph.D in Geophysics from China University of Petroleum (East China) in 2014 and was a visiting Ph.D student at Bureau of Economic Geology, The University of Texas at Austin from 2012 to 2013 sponsored by China State Scholarship Fund. His research interests are seismic modeling and seismic imaging. https://www.linkedin.com/profile/view?id=92186291

Revision as of 11:57, 21 July 2017

Shanghai2017.jpg
2017 Madagascar School in Shanghai

 

Introduction

Madagascar provides a complete environment for organizing one's research, from new software development to running computational experiments to publishing the experimental results in papers and reports, archiving them for future usage, and sharing them with colleagues and sponsors. Madagascar school has been organized many times around the word. It provides a platform for Madagascar users to learn and communicate with the developers. This Madagascar school will introduce the advanced usages for the users with fundamental knowledge of Madagascar. Besides the lecture section, this school will also features a discussion section, in which the participants are welcome to share the research experiences using Madagascar. This Madagascar school is convened by Prof. Sergey Fomel from the University of Texas at Austin and hosted by Prof. Jiubing Cheng from Tongji University.

Dates

July 10-11, 2017

Agenda

Before the school: Sunday, July 9, 2017
14:00-18:00 Bring your laptop and get individual help with Madagascar
Peng Zou, Chenlong Wang, Gang Fang

 

Day 1: Monday, July 10, 2017
8:30-8:40 Welcome (Jiubing Cheng)
8:40-9:30 Madagascar principles (Sergey Fomel)

Slides (29M)

9:30-9:40 break
9:40-10:30 Madagascar development: writing programs in C, C++, Fortran-90, and Python (Gang Fang)

Slides (4.9M)

C example
C++ example
Fortran-90 example
Python example

10:30-11:30 Plotting Guidance and SConstruct Flow (Xufei Gong)

Slides (1.5M)
Modeling example

11:30-14:00 Lunch
14:00-15:30 Parallel programming (MPI, OpenMP, Pscons) in Madagascar (Chenlong Wang)

Slides (484K)

15:30-15:50 break
15:50-17:00 Writing a reproducible paper using LaTeX and Madagascar (Jiubing Cheng)

Slides (3.7M)
Example

 


Day 2: Tuesday, July 11, 2017
8:30-10:00 Geophysicsl data processing with Madagascar (Yang Liu)

Slides (8.1M)

Seismic example
Gravity example
CSEM example

10:00-10:30 break
10:30-11:30 Additional topics (Sergey Fomel)

Slides (6.4M)
Example Jypyter notebook

11:30-14:00 Lunch
14:00-17:00 Sharing experience in Madagascar
Guoning Wu (China University of Petroleum - Beijing)

Slides (14M)

Peng Zou (Tongji University)

Slides (1.6M)

Yufeng Wang (China University of Petroleum - Beijing)

Slides (2.3M)

Location

Room 205B, Rui’an Building, Tongji University, Shanghai, China

同济大学,瑞安楼 205B室,上海市杨浦区四平路1239号

Registration

The Madagascar School participation is free but requires an application. Please send your name and affiliation to 1533006@tongji.edu.cn. The deadline is July 5, 2017.

Pre-workshop Assignment

You must download and install the Madagascar package in the days before the school. If issues come up, there will an opportunity to get installation help on Sunday, July 9. Remember to bring your laptop (Linux, Mac) to the session!

Additional Installation Requirements

  1. Latex
  2. MPICH2/OPENMPI

QQ group

Madagascar advanced school QQ group: 468749704

Organizations

The "Madagascar School of Reproducible Computational Geophysics Shanghai 2017" is organized by

  • Jiubing Cheng from School of Ocean and Earth Science, Tongji University (Shanghai, China)
  • Sergey Fomel from Jackson School of Geosciences, The University of Texas at Austin (Austin, USA)
  • Yang Liu from College of Geo-exploration Science and Technology, Jilin University (Changchun, China)
  • Gang Fang from Qingdao Institute of Marine Geology, China Geological Survey (Qingdao, China)

and hosted by Jiubing Cheng

Instructors

  • Jiubing Cheng is a Professor of School of Ocean and Earth Science, Tongji University. He received a Ph.D. in Geophysics from Tongji University in 2003. http://mgg.tongji.edu.cn/space/cjb/
  • Sergey Fomelis a Professor at the Jackson School of Geosciences, the University of Texas at Austin. He received a Ph.D. in Geophysics from Stanford University in 2001. Sergey started work on Madagascar (at that time named RSF for Regularly Sampled Format) in 2003. http://www.jsg.utexas.edu/researcher/sergey_fomel/
  • Yang Liu is a Professor of Geophysics at College of Geo-exploration science and technology at Jilin University, China. He received a Ph.D. in Geophysics from Jilin University in 2006 and was a Postdoctoral fellow at Bureau of Economic Geology, The University of Texas at Austin from 2007 to 2010. His research focuses mainly on seismic data processing. http://gest.jlu.edu.cn/?mod=info&act=view&id=2296
  • Gang Fang is an assistant research fellow at Qingdao Institute of Marine Geology, China Geological Survey. He received a Ph.D in Geophysics from China University of Petroleum (East China) in 2014 and was a visiting Ph.D student at Bureau of Economic Geology, The University of Texas at Austin from 2012 to 2013 sponsored by China State Scholarship Fund. His research interests are seismic modeling and seismic imaging. https://www.linkedin.com/profile/view?id=92186291